Are there any problems using submodules with git-annex? I have not tried it yet, I'm just asking.
Does this work well even with direct mode ?
How is this managed in direct mode ?
Coming back from direct mode to indirect mode (required when I want to run git commands) I found that the .gitmodules file was an annex symlink (to .git/annex/objects/...). I just recovered from corrupt repository and may have made mistakes, but is this a risk under normal curcumstances ?