I had one repo on HDD and another in an USB drive. After mount point changed, I went to the HDD repo folder and tried to use git remote-set url to point it to the new location, however I think I ended in a weird state. git-annex info shows this:

git-annex info
repository mode: indirect
trusted repositories: 0
semitrusted repositories: 5
    00000000-0000-0000-0000-000000000001 -- web
    26c0c4ba-6489-4416-a054-670d373f09bd -- juan@invasor.local:/Volumes/sapo_hfs/live/papers
    61158820-db14-45b9-b9f9-8619d956388e -- [usb_papers]
    d4456c86-fa2b-43a7-a132-027915390cf6 -- usb_papers
    fed56814-08c6-11e3-bf3c-af5da9f7f388 -- sapo [here]
untrusted repositories: 0
transfers in progress: none
available local disk space: 255.46 gigabytes (+1 megabyte reserved)
local annex keys: 1252
local annex size: 2.55 gigabytes
annexed files in working tree: 1297
size of annexed files in working tree: 2.7 gigabytes
bloom filter size: 16 mebibytes (0.3% full)
backend usage: 
    SHA256E: 2549

usb_papers was the original usb repo, and now a new one [usb_papers] shows. webapp shows only sapo[here] and [usb_papers], the other 2 repos are unknown. I was digging around but couldn't find a way to remove them. Seems that the webapp managed to use the new URL, but said something about "fixing repo". Any suggestions? Thanks in advance. Best regards, Juan