ReproNim https://repronim.org

The center for Reproducible Neuroimaging computation develops standards and tools to improve reproducibility. git-annex is used via DataLad and in the core of efforts such as YODA, repronim/containers, and heavily used by ReproMan.

TODOs

globus special remote as a "transport" layer [] [projects/repronim]
Posted Fri Apr 5 02:25:10 2019 by yoh

Done

git annex upgrade to not care about submod status? [projects/repronim]
Posted Mon Dec 12 23:03:31 2022 by yoh
not ask git credentials for password per each file [projects/repronim]
Posted Tue Sep 6 21:01:59 2022 by yoh
add --json-progress to `git annex add` [projects/repronim]
Posted Thu Apr 25 16:33:16 2019 by yoh

BUGs

annex add freezes before moving: stopped working [projects/repronim]
Posted Mon Jan 16 19:36:05 2023 by yoh
should create leading dirs for annex.dbdir [projects/repronim]
Posted Wed Dec 28 16:23:48 2022 by yoh
Unable to addurl file:/// on Windows [projects/repronim]
Posted Tue Dec 11 16:50:29 2018 by yoh

Done

git-annex precommit . gets stuck after likely interrupted `annex add` call [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
7.20181211+git29-gab4a1bed9 fails tests during neurodebian build [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
Unable to get/addurl to http link: download failed: InvalidHeader "preload" [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
add --json should provide a "note" with an error message in case of an error [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
windows: autostart for annex 64bit looks under x86 [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
get fails to place v7 unlocked file content into the file tree in v7 in repo with detached HEAD [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
git annex test never exits? [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
Please include version of used to build ghc within "git annex version" [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
fails to init under a directory with a "tricky" name [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
annex sets remote (regular http) to be ignored while running in docker container [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
3 tests fail while trying to build fresh git annex 6.20181011+git109-gff9ba1f4d [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
initial get -J on exported S3 bucket fails [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
regression: http downloads redirecting to ftp are no longer supported [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
addurl fails with non-youtube url with "This url is supported by youtube-dl, but youtube-dl could potentially access any address" [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
multiple ssh prompts, and thread blocked indefinitely in an ??? transaction [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
Regression in `find --json` output [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by kyle
annex init no longer generates default description [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by kyle
regression: fails to detect need for pidlock on an NSF mount [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
double rsync run and test failure [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
rmurl marks url not available in wrong remote [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh
gpgconf: invalid option "--kill" (gpg 2.0.22) [projects/repronim]
Posted Thu Jan 5 17:30:31 2023 by yoh